Introduction | Prepare Layout For Accommodating Multiple Smaller Plots | Optimal Legend Location | One More Histogram Function ... | Small Histogram(s) as Legend | Violin Plots | Paired Violin Plots | Plotting Sorted Values ('Summed Frequency') | Color-Code Numeric Content Of Matrix (Heatmap) | Examine Counts Based On Variable Threshold Levels (for ROC curves) | Compare Two Groups With Sub-Organisation Each | Plotting Linear Regression And Confidence Intervals | Principal Components Analysis (PCA) | PCA out of wrGraph | Label all points in PCA | MA-Plot | Volcano-Plot | Standalone html Page With Plot And Mouse-Over Interactive Features | Acknowledgements | Appendix: Session-Info
Package: wrGraph 1.3.16
wrGraph: Graphics in the Context of Analyzing High-Throughput Data
Additional options for making graphics in the context of analyzing high-throughput data are available here. This includes automatic segmenting of the current device (eg window) to accommodate multiple new plots, automatic checking for optimal location of legends in plots, small histograms to insert as legends, histograms re-transforming axis labels to linear when plotting log2-transformed data, a violin-plot <doi:10.1080/00031305.1998.10480559> function for a wide variety of input-formats, principal components analysis (PCA) <doi:10.1080/14786440109462720> with bag-plots <doi:10.1080/00031305.1999.10474494> to highlight and compare the center areas for groups of samples, generic MA-plots (differential- versus average-value plots) <doi:10.1093/nar/30.4.e15>, staggered count plots and generation of mouse-over interactive html pages.
Authors:
wrGraph_1.3.16.tar.gz
wrGraph_1.3.16.zip(r-4.7)wrGraph_1.3.16.zip(r-4.6)wrGraph_1.3.16.zip(r-4.5)
wrGraph_1.3.16.tgz(r-4.6-any)wrGraph_1.3.16.tgz(r-4.5-any)
wrGraph_1.3.16.tar.gz(r-4.7-any)wrGraph_1.3.16.tar.gz(r-4.6-any)
wrGraph_1.3.16.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
wrGraph/json (API)
| # Install 'wrGraph' in R: |
| install.packages('wrGraph', repos = c('https://wraff.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:b6ef344a20. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 146 | ||
| source / vignettes | OK | 204 | ||
| linux-release-x86_64 | OK | 171 | ||
| macos-release-arm64 | OK | 111 | ||
| macos-oldrel-arm64 | OK | 86 | ||
| windows-devel | OK | 91 | ||
| windows-release | OK | 90 | ||
| windows-oldrel | OK | 104 | ||
| wasm-release | OK | 120 |
Exports:.addTextToPoints.bestLegendLoc.determFigMargPix.predPointsPix.serachColNameaddBagPlotcheckForLegLocconvertPlotCoordPixcumFrqPlotfoldChangeArrowhistWimageWlegendHistMAplotWmouseOverHtmlFilepartitionPlotplotBy2GroupsplotLinRegplotPCAwplotW2LegprofileAsClustaggerdCountsPlotvioplotWVolcanoPlotW
Dependencies:latticeMASSRColorBrewerwrMisc
